Spatially-constrained null models in neuroimaging¶

Overview of this walkthrough¶

This walkthrough is designed to accompany the manuscript “Comparing spatial null models for brain maps” by Ross Markello and Bratislav Misic. While we strove to be detailed in our manuscript, we acknowledge that working through code and data files (however well-documented) to reproduce results from other people can be…frustrating. This walkthrough attempts to lay out the relevant steps required to install + set up your computing environment, how to get access to the (minimal) data required to run the code, and what commands + scripts you need to run to re-generate our results. Of course, you’ll need to refer to the actual code files in our GitHub repository for this to all make sense, but hopefully it helps make this whole reproducibility process a bit less garish.

Questions?¶

If anything in this walkthrough (or in our repository or our manuscript!) is confusing / unclear / whathaveyou, you can reach out by either (1) opening an issue on our GitHub repository, or (2) emailing Ross.